Luxembourg Research Evaluation 2022

1 Introduction: var_inst var_inst

XXX XXX To come XXX

2 General Overview over articles

2.1 Main Indicators: Publications, Authors, Countries

MAIN INFORMATION ABOUT DATA

 Timespan                              2016 : 2021 
 Sources (Journals, Books, etc)        2178 
 Documents                             7999 
 Average years from publication        3.37 
 Average citations per documents       17.29 
 Average citations per year per doc    3.596 
 References                            382989 
 
DOCUMENT TYPES                     
 article               6878 
 book                  2 
 book chapter          94 
 conference paper      671 
 data paper            15 
 editorial             4 
 letter                10 
 note                  26 
 review                297 
 short survey          2 
 
DOCUMENT CONTENTS
 Keywords Plus (ID)                    34951 
 Author's Keywords (DE)                20759 
 
AUTHORS
 Authors                               27831 
 Author Appearances                    45659 
 Authors of single-authored documents  150 
 Authors of multi-authored documents   27681 
 
AUTHORS COLLABORATION
 Single-authored documents             179 
 Documents per Author                  0.287 
 Authors per Document                  3.48 
 Co-Authors per Documents              5.71 
 Collaboration Index                   3.54 
 

Annual Scientific Production

Annual Percentage Growth Rate 3.755425 


Most Productive Authors

Top manuscripts per citations

Corresponding Author's Countries

SCP: Single Country Publications

MCP: Multiple Country Publications


Total Citations per Country

Most Relevant Sources

Most Relevant Keywords

NA

2.2 Cited references

Top 20 cited references (by corpus documents):

CR	n
FIERER, N., BRADFORD, M.A., JACKSON, R.B., TOWARD AN ECOLOGICAL CLASSIFICATION OF SOIL BACTERIA (2007) ECOLOGY, 88, PP. 1354-1364	190
EDGAR, R.C., SEARCH AND CLUSTERING ORDERS OF MAGNITUDE FASTER THAN BLAST (2010) BIOINFORMATICS, 26, PP. 2460-2461	159
DUNCAN, D.B., MULTIPLE RANGE AND MULTIPLE F TESTS (1955) BIOMETRICS, 11, PP. 1-42	128
MA, J.F., TAMAI, K., YAMAJI, N., MITANI, N., KONISHI, S., KATSUHARA, M., ISHIGURO, M., YANO, M., A SILICON TRANSPORTER IN RICE (2006) NATURE, 440, PP. 688-691	88
EDGAR, R.C., HAAS, B.J., CLEMENTE, J.C., QUINCE, C., KNIGHT, R., UCHIME IMPROVES SENSITIVITY AND SPEED OF CHIMERA DETECTION (2011) BIOINFORMATICS, 27, PP. 2194-2200	87
MA, J.F., YAMAJI, N., MITANI, N., TAMAI, K., KONISHI, S., FUJIWARA, T., KATSUHARA, M., YANO, M., AN EFFLUX TRANSPORTER OF SILICON IN RICE (2007) NATURE, 448, PP. 209-212	68
LAUBER, C.L., HAMADY, M., KNIGHT, R., FIERER, N., PYROSEQUENCING-BASED ASSESSMENT OF SOIL PH AS A PREDICTOR OF SOIL BACTERIAL COMMUNITY STRUCTURE AT THE CONTINENTAL SCALE (2009) APPL. ENVIRON. MICROBIOL., 75, PP. 5111-5120	61
YANG, J., YAN, R., ROY, A., XU, D., POISSON, J., ZHANG, Y., THE I-TASSER SUITE: PROTEIN STRUCTURE AND FUNCTION PREDICTION (2015) NAT. METHODS, 12, PP. 7-8	55
ZAK, D.R., HOLMES, W.E., WHITE, D.C., PEACOCK, A.D., TILMAN, D., PLANT DIVERSITY, SOIL MICROBIAL COMMUNITIES, AND ECOSYSTEM FUNCTION: ARE THERE ANY LINKS? (2003) ECOLOGY, 84, PP. 2042-2050	55
CAPORASO, J.G., KUCZYNSKI, J., STOMBAUGH, J., BITTINGER, K., BUSHMAN, F.D., COSTELLO, E.K., QIIME ALLOWS ANALYSIS OF HIGH-THROUGHPUT COMMUNITY SEQUENCING DATA (2010) NAT. METHODS, 7, PP. 335-336	44
ZAKERI, B., SYRI, S., ELECTRICAL ENERGY STORAGE SYSTEMS: A COMPARATIVE LIFE CYCLE COST ANALYSIS (2015) RENEW. SUSTAIN. ENERGY REV., 42, PP. 569-596	43
EDGAR, R.C., UPARSE: HIGHLY ACCURATE OTU SEQUENCES FROM MICROBIAL AMPLICON READS (2013) NAT. METHODS, 10, PP. 996-998	41
KIRCHNER, J.W., FENG, X., NEAL, C., FRACTAL STREAM CHEMISTRY AND ITS IMPLICATIONS FOR CONTAMINANT TRANSPORT IN CATCHMENTS (2000) NATURE, 403, PP. 524-527	39
MCGUIRE, K.J., MCDONNELL, J.J., A REVIEW AND EVALUATION OF CATCHMENT TRANSIT TIME MODELING (2006) J. HYDROL., 330, PP. 543-563	38
YAMAJI, N., MITATNI, N., MA, J.F., A TRANSPORTER REGULATING SILICON DISTRIBUTION IN RICE SHOOTS (2008) PLANT CELL, 20, PP. 1381-1389	38
DANSGAARD, W., STABLE ISOTOPES IN PRECIPITATION (1964) TELLUS, 16, PP. 436-468	37
MITANI, N., CHIBA, Y., YAMAJI, N., MA, J.F., IDENTIFICATION AND CHARACTERIZATION OF MAIZE AND BARLEY LSI2-LIKE SILICON EFFLUX TRANSPORTERS REVEALS A DISTINCT SILICON UPTAKE SYSTEM FROM THAT IN RICE (2009) PLANT CELL, 21, PP. 2133-2142	35
VAN DER ENT, A., BAKER, A.J.M., REEVES, R.D., POLLARD, A.J., SCHAT, H., HYPERACCUMULATORS OF METAL AND METALLOID TRACE ELEMENTS: FACTS AND FICTION (2013) PLANT SOIL, 362, PP. 319-334	34
YANG, J., YAN, R., ROY, A., XU, D., POISSON, J., ZHANG, Y., THE I-TASSER SUITE: PROTEIN STRUCTURE AND FUNCTION PREDICTION (2015) NAT METHODS, 12, PP. 7-8	34
BARDGETT, R.D., VAN DER PUTTEN, W.H., BELOWGROUND BIODIVERSITY AND ECOSYSTEM FUNCTIONING (2014) NATURE, 515, PP. 505-511	33

3 Topic modelling

Loading required package: RColorBrewer

3.1 Topics by topwords

3.2 Topics over time

`summarise()` has grouped output by 'PY'. You can override using the `.groups` argument.

4 Knowledge Bases: Co-Citation network analysis

Note: This analysis refers the co-citation analysis, where the cited references and not the original publications are the unit of analysis. See tab Technical descriptionfor additional explanations

4.1 Knowledge Bases summary

4.1.1 Main Indicators

In order to partition networks into components or clusters, we deploy a community detection technique based on the Lovain Algorithm (Blondel et al., 2008). The Lovain Algorithm is a heuristic method that attempts to optimize the modularity of communities within a network by maximizing within- and minimizing between-community connectivity. We identify the following communities = knowledge bases.

com	name	dgr_int	dgr
1	MCGUIRE K.J. MCDONNELL J.J. A REVIEW AND EVALUATION OF CATCHMENT TRANSIT TIME MODELING (2006)	5066	5212
1	HARMAN C.J. TIME-VARIABLE TRANSIT TIME DISTRIBUTIONS AND TRANSPORT: THEORY AND APPLICATION TO STORAGE-DEPENDENT TRANSPORT OF CHLORIDE IN A WATERSHE...	3586	3713
1	TETZLAFF D. BIRKEL C. DICK J. GERIS J. SOULSBY C. STORAGE DYNAMICS IN HYDROPEDOLOGICAL UNITS CONTROL HILLSLOPE CONNECTIVITY RUNOFF GENERATION AND T...	2492	2595
1	MCGUIRE K.J. MCDONNELL J.J. WEILER M. KENDALL C. MCGLYNN B.L. WELKER J.M. SEIBERT J. THE ROLE OF TOPOGRAPHY ON CATCHMENT-SCALE WATER RESIDENCE TIME...	2279	2354
1	JASECHKO S. KIRCHNER J.W. WELKER J.M. MCDONNELL J.J. SUBSTANTIAL PROPORTION OF GLOBAL STREAMFLOW LESS THAN THREE MONTHS OLD (2016)	2277	2323
1	BOTTER G. BERTUZZO E. RINALDO A. CATCHMENT RESIDENCE AND TRAVEL TIME DISTRIBUTIONS: THE MASTER EQUATION (2011)	2276	2378
1	KIRCHNER J.W. FENG X. NEAL C. FRACTAL STREAM CHEMISTRY AND ITS IMPLICATIONS FOR CONTAMINANT TRANSPORT IN CATCHMENTS (2000)	2251	2309
1	HRACHOWITZ M. SAVENIJE H. BOGAARD T.A. TETZLAFF D. SOULSBY C. WHAT CAN FLUX TRACKING TEACH US ABOUT WATER AGE DISTRIBUTION PATTERNS AND THEIR TEMPO...	2093	2270
1	BOTTER G. BERTUZZO E. RINALDO A. TRANSPORT IN THE HYDROLOGIC RESPONSE: TRAVEL TIME DISTRIBUTIONS SOIL MOISTURE DYNAMICS AND THE OLD WATER PARADOX (...	2041	2142
1	KLAUS J. MCDONNELL J.J. HYDROGRAPH SEPARATION USING STABLE ISOTOPES: REVIEW AND EVALUATION (2013)	2007	2088
2	ROUND F.E. CRAWFORD R.M. MANN D.G. (1990)	5576	5611
2	VAN DAM H. MERTENS A. SINKELDAM J. A CODED CHECKLIST AND ECOLOGICAL INDICATOR VALUES OF FRESHWATER DIATOMS FROM THE NETHERLANDS (1994)	1577	1632
2	KÜTZING F.T. (1844)	1199	1202
2	ROSS R. COX E.J. KARAYEVA N.I. MANN D.G. PADDOCK T.B.B. SIMONSEN R. SIMS P.A. AN AMENDED TERMINOLOGY FOR THE SILICEOUS COMPONENTS OF THE DIATOM CEL...	1049	1049
2	RIMET F. BOUCHEZ A. LIFE-FORMS CELL-SIZES AND ECOLOGICAL GUILDS OF DIATOMS IN EUROPEAN RIVERS (2012)	618	625
2	MANN D.G. VANORMELINGEN P. AN INORDINATE FONDNESS? THE NUMBER DISTRIBUTIONS AND ORIGINS OF DIATOM SPECIES (2013)	546	550
2	HOFMANN G. WERUM M. LANGE-BERTALOT H. (2011)	514	520
2	WILLIAMS D.M. ROUND F.E. REVISION OF THE GENUS FRAGILARIA (1987)	507	507
2	ROUND F.E. BUKHTIYAROVA L. FOUR NEW GENERA BASED ON ACHNANTHES (ACHNANTHIDIUM)	473	473
2	KRAMMER K. CYMBOPLEURA DELICATA NAVICYMBULA GOMPHOCYMBELLOPSIS AFROCYMBELLA (2003)	464	468
3	FIERER N. BRADFORD M.A. JACKSON R.B. TOWARD AN ECOLOGICAL CLASSIFICATION OF SOIL BACTERIA (2007)	4322	4326
3	LAUBER C.L. HAMADY M. KNIGHT R. FIERER N. PYROSEQUENCING-BASED ASSESSMENT OF SOIL PH AS A PREDICTOR OF SOIL BACTERIAL COMMUNITY STRUCTURE AT THE CO...	4120	4131
3	EDGAR R.C. SEARCH AND CLUSTERING ORDERS OF MAGNITUDE FASTER THAN BLAST (2010)	3162	3223
3	FIERER N. JACKSON R.B. THE DIVERSITY AND BIOGEOGRAPHY OF SOIL BACTERIAL COMMUNITIES (2006)	2220	2220
3	EDGAR R.C. HAAS B.J. CLEMENTE J.C. QUINCE C. KNIGHT R. UCHIME IMPROVES SENSITIVITY AND SPEED OF CHIMERA DETECTION (2011)	1834	1851
3	TRESEDER K.K. NITROGEN ADDITIONS AND MICROBIAL BIOMASS: A META-ANALYSIS OF ECOSYSTEM STUDIES (2008)	1489	1492
3	BERG G. SMALLA K. PLANT SPECIES AND SOIL TYPE COOPERATIVELY SHAPE THE STRUCTURE AND FUNCTION OF MICROBIAL COMMUNITIES IN THE RHIZOSPHERE (2009)	1379	1388
3	RAMIREZ K.S. CRAINE J.M. FIERER N. CONSISTENT EFFECTS OF NITROGEN AMENDMENTS ON SOIL MICROBIAL COMMUNITIES AND PROCESSES ACROSS BIOMES (2012)	1259	1259
3	JANSSEN P.H. IDENTIFYING THE DOMINANT SOIL BACTERIAL TAXA IN LIBRARIES OF 16S RRNA AND 16S RRNA GENES (2006)	1235	1235
3	PHILIPPOT L. RAAIJMAKERS J.M. LEMANCEAU P. VAN DER PUTTEN W.H. GOING BACK TO THE ROOTS: THE MICROBIAL ECOLOGY OF THE RHIZOSPHERE (2013)	1158	1161
4	MA J.F. YAMAJI N. A COOPERATIVE SYSTEM OF SILICON TRANSPORT IN PLANTS (2015)	3549	3549
4	MA J.F. TAMAI K. YAMAJI N. MITANI N. KONISHI S. KATSUHARA M. ISHIGURO M. YANO M. A SILICON TRANSPORTER IN RICE (2006)	2961	2961
4	MA J.F. YAMAJI N. SILICON UPTAKE AND ACCUMULATION IN HIGHER PLANTS (2006)	2882	2882
4	MA J.F. YAMAJI N. MITANI N. TAMAI K. KONISHI S. FUJIWARA T. KATSUHARA M. YANO M. AN EFFLUX TRANSPORTER OF SILICON IN RICE (2007)	2472	2472
4	MA J.F. ROLE OF SILICON IN ENHANCING THE RESISTANCE OF PLANTS TO BIOTIC AND ABIOTIC STRESSES (2004)	2460	2460
4	EPSTEIN E. THE ANOMALY OF SILICON IN PLANT BIOLOGY (1994)	2432	2432
4	EPSTEIN E. SILICON (1999)	2275	2275
4	HODSON M.J. WHITE P.J. MEAD A. BROADLEY M.R. PHYLOGENETIC VARIATION IN THE SILICON COMPOSITION OF PLANTS (2005)	2036	2036
4	CHIBA Y. MITANI N. YAMAJI N. MA J.F. HVLSI1 IS A SILICON INFLUX TRANSPORTER IN BARLEY (2009)	1946	1946
4	MITANI N. MA J.F. UPTAKE SYSTEM OF SILICON IN DIFFERENT PLANT SPECIES (2005)	1504	1504
5	SCHOUPS G. VRUGT J.A. A FORMAL LIKELIHOOD FUNCTION FOR PARAMETER AND PREDICTIVE INFERENCE OF HYDROLOGIC MODELS WITH CORRELATED HETEROSCEDASTIC AND ...	1414	1504
5	KIRCHNER J.W. GETTING THE RIGHT ANSWERS FOR THE RIGHT REASONS: LINKING MEASUREMENTS ANALYSES AND MODELS TO ADVANCE THE SCIENCE OF HYDROLOGY (2006)	1405	2269
5	GUPTA H.V. KLING H. YILMAZ K.K. MARTINEZ G.F. DECOMPOSITION OF THE MEAN SQUARED ERROR AND NSE PERFORMANCE CRITERIA: IMPLICATIONS FOR IMPROVING HYDR...	1209	1577
5	SEIBERT J. MCDONNELL J.J. ON THE DIALOG BETWEEN EXPERIMENTALIST AND MODELER IN CATCHMENT HYDROLOGY: USE OF SOFT DATA FOR MULTICRITERIA MODEL CALIBR...	1055	1259
5	CLARK M.P. KAVETSKI D. FENICIA F. PURSUING THE METHOD OF MULTIPLE WORKING HYPOTHESES FOR HYDROLOGICAL MODELING (2011)	1049	1171
5	GUPTA H.V. WAGENER T. LIU Y. RECONCILING THEORY WITH OBSERVATIONS: ELEMENTS OF A DIAGNOSTIC APPROACH TO MODEL EVALUATION (2008)	1044	1076
5	FENICIA F. KAVETSKI D. SAVENIJE H.H.G. ELEMENTS OF A FLEXIBLE APPROACH FOR CONCEPTUAL HYDROLOGICAL MODELING: 1. MOTIVATION AND THEORETICAL DEVELOPM...	950	986
5	GHARARI S. HRACHOWITZ M. FENICIA F. GAO H. SAVENIJE H.H.G. USING EXPERT KNOWLEDGE TO INCREASE REALISM IN ENVIRONMENTAL SYSTEM MODELS CAN DRAMATICAL...	915	992
5	HRACHOWITZ M. FOVET O. RUIZ L. EUSER T. GHARARI S. NIJZINK R. FREER J. GASCUEL-ODOUX C. PROCESS CONSISTENCY IN MODELS: THE IMPORTANCE OF SYSTEM SIG...	850	917
5	EUSER T. WINSEMIUS H.C. HRACHOWITZ M. FENICIA F. UHLENBROOK S. SAVENIJE H.H.G. A FRAMEWORK TO ASSESS THE REALISM OF MODEL STRUCTURES USING HYDROLOG...	843	870
6	MARTINIS S. TWELE A. VOIGT S. TOWARDS OPERATIONAL NEAR REAL-TIME FLOOD DETECTION USING A SPLIT-BASED AUTOMATIC THRESHOLDING PROCEDURE ON HIGH RESOL...	1730	1730
6	TWELE A. CAO W. PLANK S. MARTINIS S. SENTINEL-1-BASED FLOOD MAPPING: A FULLY AUTOMATED PROCESSING CHAIN (2016)	1290	1290
6	PULVIRENTI L. PIERDICCA N. CHINI M. GUERRIERO L. AN ALGORITHM FOR OPERATIONAL FLOOD MAPPING FROM SYNTHETIC APERTURE RADAR (SAR)	1279	1279
6	MARTINIS S. KERSTEN J. TWELE A. A FULLY AUTOMATED TERRASAR-X BASED FLOOD SERVICE (2015)	1160	1160
6	CHINI M. HOSTACHE R. GIUSTARINI L. MATGEN P. A HIERARCHICAL SPLIT-BASED APPROACH FOR PARAMETRIC THRESHOLDING OF SAR IMAGES: FLOOD INUNDATION AS A T...	895	895
6	MATGEN P. HOSTACHE R. SCHUMANN G. PFISTER L. HOFFMANN L. SAVENIJE H.H.G. TOWARDS AN AUTOMATED SAR-BASED FLOOD MONITORING SYSTEM: LESSONS LEARNED FR...	796	796
6	PULVIRENTI L. CHINI M. PIERDICCA N. BONI G. USE OF SAR DATA FOR DETECTING FLOODWATER IN URBAN AND AGRICULTURAL AREAS: THE ROLE OF THE INTERFEROMETR...	755	755
6	SCHLAFFER S. MATGEN P. HOLLAUS M. WAGNER W. FLOOD DETECTION FROM MULTI-TEMPORAL SAR DATA USING HARMONIC ANALYSIS AND CHANGE DETECTION (2015)	645	645
6	PULVIRENTI L. CHINI M. PIERDICCA N. GUERRIERO L. FERRAZZOLI P. FLOOD MONITORING USING MULTI-TEMPORAL COSMO-SKYMED DATA: IMAGE SEGMENTATION AND SIGN...	620	623
6	GIUSTARINI L. HOSTACHE R. KAVETSKI D. CHINI M. CORATO G. SCHLAFFER S. MATGEN P. PROBABILISTIC FLOOD MAPPING USING SYNTHETIC APERTURE RADAR DATA (2016)	580	580

4.1.2 Development of Knowledge Bases

4.2 Technical description

In a co-cittion network, the strength of the relationship between a reference pair \(m\) and \(n\) (\(s_{m,n}^{coc}\)) is expressed by the number of publications \(C\) which are jointly citing reference \(m\) and \(n\).

\[s_{m,n}^{coc} = \sum_i c_{i,m} c_{i,n}\]

The intuition here is that references which are frequently cited together are likely to share commonalities in theory, topic, methodology, or context. It can be interpreted as a measure of similarity as evaluated by other researchers that decide to jointly cite both references. Because the publication process is time-consuming, co-citation is a backward-looking measure, which is appropriate to map the relationship between core literature of a field.

5 Research Areas: Bibliographic coupling analysis

5.1 Research Areas main summary

This is arguably the more interesting part. Here, we identify the literature’s current knowledge frontier by carrying out a bibliographic coupling analysis of the publications in our corpus. This measure uses bibliographical information of publications to establish a similarity relationship between them. Again, method details to be found in the tab Technical description. As you will see, we identify the main research area, but also a set of adjacent research areas with some theoretical/methodological/application overlap.

5.1.1 Main Characteristics

To identify communities in the field’s knowledge frontier (labeled research areas) we again use the Lovain Algorithm (Blondel et al., 2008). We identify the following communities = research areas.

5.1.2 Categorization

I up to now gain only provide the 10 most central articles, which can be used to classify them

com_name	AU	PY	TI	dgr_int	TC	TC_year
1	ZENG J;LIU X;SONG L;LI...	2016	NITROGEN FERTILIZATION DIRECTLY AFFECTS SOIL BACTERIAL DIVERSITY AND INDIRECTLY AFFECTS BACTERIAL COMMUNITY COMPOSITION	7.8539881	323	53.833333
1	FIERER N	2017	EMBRACING THE UNKNOWN: DISENTANGLING THE COMPLEXITIES OF THE SOIL MICROBIOME	1.7497254	1036	207.200000
1	ZHAO J;NI T;LI J;LU Q;...	2016	EFFECTS OF ORGANIC-INORGANIC COMPOUND FERTILIZER WITH REDUCED CHEMICAL FERTILIZER APPLICATION ON CROP YIELDS, SOIL BIOLOGI...	9.1884165	196	32.666667
1	CARINI P;MARSDEN PJ;LE...	2016	RELIC DNA IS ABUNDANT IN SOIL AND OBSCURES ESTIMATES OF SOIL MICROBIAL DIVERSITY	4.4628867	400	66.666667
1	FRANCIOLI D;SCHULZ E;L...	2016	MINERAL VS. ORGANIC AMENDMENTS: MICROBIAL COMMUNITY STRUCTURE, ACTIVITY AND ABUNDANCE OF AGRICULTURALLY RELEVANT MICROBES ...	5.6816985	295	49.166667
1	KIELAK AM;BARRETO CC;K...	2016	THE ECOLOGY OF ACIDOBACTERIA: MOVING BEYOND GENES AND GENOMES	3.7372131	440	73.333333
1	ZHANG Y;SHEN H;HE X;TH...	2017	FERTILIZATION SHAPES BACTERIAL COMMUNITY STRUCTURE BY ALTERATION OF SOIL PH	10.8095291	113	22.600000
1	DAI Z;SU W;CHEN H;BARB...	2018	LONG-TERM NITROGEN FERTILIZATION DECREASES BACTERIAL DIVERSITY AND FAVORS THE GROWTH OF ACTINOBACTERIA AND PROTEOBACTERIA ...	6.0589642	192	48.000000
1	JIAN S;LI J;CHEN J;WAN...	2016	SOIL EXTRACELLULAR ENZYME ACTIVITIES, SOIL CARBON AND NITROGEN STORAGE UNDER NITROGEN FERTILIZATION: A META-ANALYSIS	3.4136078	309	51.500000
1	BANERJEE S;KIRKBY CA;S...	2016	NETWORK ANALYSIS REVEALS FUNCTIONAL REDUNDANCY AND KEYSTONE TAXA AMONGST BACTERIAL AND FUNGAL COMMUNITIES DURING ORGANIC M...	3.0571018	341	56.833333
2	KULIKOVSKIY M;MALTSEV ...	2019	DESCRIPTION OF A NEW DIATOM GENUS DOROFEYUKEA GEN. NOV. WITH REMARKS ON PHYLOGENY OF THE FAMILY STAURONEIDACEAE	5.1810609	42	14.000000
2	RIVERA SF;VASSELON V;J...	2018	METABARCODING OF LAKE BENTHIC DIATOMS: FROM STRUCTURE ASSEMBLAGES TO ECOLOGICAL ASSESSMENT	3.5571417	58	14.500000
2	NAKOV T;BEAULIEU JM;AL...	2018	ACCELERATED DIVERSIFICATION IS RELATED TO LIFE HISTORY AND LOCOMOTION IN A HYPERDIVERSE LINEAGE OF MICROBIAL EUKARYOTES (D...	2.3952655	54	13.500000
2	RIMET F;CHAUMEIL P;KEC...	2016	R-SYST::DIATOM: AN OPEN-ACCESS AND CURATED BARCODE DATABASE FOR DIATOMS AND FRESHWATER MONITORING	2.2164562	58	9.666667
2	SOININEN J;JAMONEAU A;...	2016	GLOBAL PATTERNS AND DRIVERS OF SPECIES AND TRAIT COMPOSITION IN DIATOMS	1.3355206	94	15.666667
2	MEDLIN LK	2016	EVOLUTION OF THE DIATOMS: MAJOR STEPS IN THEIR EVOLUTION AND A REVIEW OF THE SUPPORTING MOLECULAR AND MORPHOLOGICAL EVIDENCE	2.0224517	50	8.333333
2	ZIDAROVA R;KOPALOVÁ K;...	2016	TEN NEW BACILLARIOPHYTA SPECIES FROM JAMES ROSS ISLAND AND THE SOUTH SHETLAND ISLANDS (MARITIME ANTARCTIC REGION)	5.7865626	17	2.833333
2	FALASCO E;PIANO E;BONA F	2016	DIATOM FLORA IN MEDITERRANEAN STREAMS: FLOW INTERMITTENCY THREATENS ENDANGERED SPECIES	3.8854273	25	4.166667
2	THOMAS EW;STEPANEK JG;...	2016	HISTORICAL AND CURRENT PERSPECTIVES ON THE SYSTEMATICS OF THE 'ENIGMATIC' DIATOM GENUS RHOICOSPHENIA (BACILLARIOPHYTA), WI...	5.4735074	17	2.833333
2	KECK F;RIMET F;FRANC A...	2016	PHYLOGENETIC SIGNAL IN DIATOM ECOLOGY: PERSPECTIVES FOR AQUATIC ECOSYSTEMS BIOMONITORING	2.9700262	31	5.166667
3	KIRCHNER JW	2016	AGGREGATION IN ENVIRONMENTAL SYSTEMS-PART 1: SEASONAL TRACER CYCLES QUANTIFY YOUNG WATER FRACTIONS, BUT NOT MEAN TRANSIT T...	7.9938246	182	30.333333
3	SPRENGER M;LEISTERT H;...	2016	ILLUMINATING HYDROLOGICAL PROCESSES AT THE SOIL-VEGETATION-ATMOSPHERE INTERFACE WITH WATER STABLE ISOTOPES	4.3973884	232	38.666667
3	BENETTIN P;SOULSBY C;B...	2017	USING SAS FUNCTIONS AND HIGH-RESOLUTION ISOTOPE DATA TO UNRAVEL TRAVEL TIME DISTRIBUTIONS IN HEADWATER CATCHMENTS	10.2908499	79	15.800000
3	HRACHOWITZ M;BENETTIN ...	2016	TRANSIT TIMES—THE LINK BETWEEN HYDROLOGY AND WATER QUALITY AT THE CATCHMENT SCALE	5.9947385	132	22.000000
3	SPRENGER M;STUMPP C;WE...	2019	THE DEMOGRAPHICS OF WATER: A REVIEW OF WATER AGES IN THE CRITICAL ZONE	7.6241869	98	32.666667
3	KIRCHNER JW	2016	AGGREGATION IN ENVIRONMENTAL SYSTEMS-PART 2: CATCHMENT MEAN TRANSIT TIMES AND YOUNG WATER FRACTIONS UNDER HYDROLOGIC NONST...	7.4768418	98	16.333333
3	SPRENGER M;TETZLAFF D;...	2017	EVAPORATION FRACTIONATION IN A PEATLAND DRAINAGE NETWORK AFFECTS STREAM WATER ISOTOPE COMPOSITION	7.8288782	75	15.000000
3	SPRENGER M;SEEGER S;BL...	2016	TRAVEL TIMES IN THE VADOSE ZONE: VARIABILITY IN SPACE AND TIME	7.6619636	76	12.666667
3	BERGHUIJS WR;KIRCHNER JW	2017	THE RELATIONSHIP BETWEEN CONTRASTING AGES OF GROUNDWATER AND STREAMFLOW	10.0873529	49	9.800000
3	SPRENGER M;TETZLAFF D;...	2017	SOIL WATER STABLE ISOTOPES REVEAL EVAPORATION DYNAMICS AT THE SOIL-PLANT-ATMOSPHERE INTERFACE OF THE CRITICAL ZONE	5.6416644	81	16.200000
4	COSKUN D;DESHMUKH R;SO...	2019	THE CONTROVERSIES OF SILICON'S ROLE IN PLANT BIOLOGY	7.0294972	244	81.333333
4	COSKUN D;BRITTO DT;HUY...	2016	THE ROLE OF SILICON IN HIGHER PLANTS UNDER SALINITY AND DROUGHT STRESS	5.4944986	194	32.333333
4	YAN G-C;NIKOLIC M;YE M...	2018	SILICON ACQUISITION AND ACCUMULATION IN PLANT AND ITS SIGNIFICANCE FOR AGRICULTURE	8.7596836	80	20.000000
4	FREW A;WESTON LA;REYNO...	2018	THE ROLE OF SILICON IN PLANT BIOLOGY: A PARADIGM SHIFT IN RESEARCH APPROACH	6.2130338	112	28.000000
4	GUERRIERO G;HAUSMAN J-...	2016	SILICON AND THE PLANT EXTRACELLULAR MATRIX	5.5925121	121	20.166667
4	LUYCKX M;HAUSMAN J-F;L...	2017	SILICON AND PLANTS: CURRENT KNOWLEDGE AND TECHNOLOGICAL PERSPECTIVES	2.8844434	234	46.800000
4	DESHMUKH R;BÉLANGER RR	2016	MOLECULAR EVOLUTION OF AQUAPORINS AND SILICON INFLUX IN PLANTS	6.1932997	103	17.166667
4	BHAT JA;SHIVARAJ SM;SI...	2019	ROLE OF SILICON IN MITIGATION OF HEAVY METAL STRESSES IN CROP PLANTS	4.5947521	129	43.000000
4	COOKE J;LEISHMAN MR	2016	CONSISTENT ALLEVIATION OF ABIOTIC STRESS WITH SILICON ADDITION: A META-ANALYSIS	4.2046436	129	21.500000
4	RIOS JJ;MARTÍNEZ-BALLE...	2017	SILICON-MEDIATED IMPROVEMENT IN PLANT SALINITY TOLERANCE: THE ROLE OF AQUAPORINS	5.5219754	93	18.600000
5	TWELE A;CAO W;PLANK S;...	2016	SENTINEL-1-BASED FLOOD MAPPING: A FULLY AUTOMATED PROCESSING CHAIN	4.3645537	255	42.500000
5	CHINI M;HOSTACHE R;GIU...	2017	A HIERARCHICAL SPLIT-BASED APPROACH FOR PARAMETRIC THRESHOLDING OF SAR IMAGES: FLOOD INUNDATION AS A TEST CASE	6.8267925	129	25.800000
5	TENG J;JAKEMAN AJ;VAZE...	2017	FLOOD INUNDATION MODELLING: A REVIEW OF METHODS, RECENT ADVANCES AND UNCERTAINTY ANALYSIS	1.4126702	469	93.800000
5	SHEN X;WANG D;MAO K;AN...	2019	INUNDATION EXTENT MAPPING BY SYNTHETIC APERTURE RADAR: A REVIEW	7.0441229	86	28.666667
5	CHINI M;PELICH R;PULVI...	2019	SENTINEL-1 INSAR COHERENCE TO DETECT FLOODWATER IN URBAN AREAS: HOUSTON AND HURRICANE HARVEY AS A TEST CASE	6.6039647	91	30.333333
5	PULVIRENTI L;CHINI M;P...	2016	USE OF SAR DATA FOR DETECTING FLOODWATER IN URBAN AND AGRICULTURAL AREAS: THE ROLE OF THE INTERFEROMETRIC COHERENCE	5.4120537	111	18.500000
5	CIAN F;MARCONCINI M;CE...	2018	NORMALIZED DIFFERENCE FLOOD INDEX FOR RAPID FLOOD MAPPING: TAKING ADVANTAGE OF EO BIG DATA	5.5711334	89	22.250000
5	DEVRIES B;HUANG C;ARMS...	2020	RAPID AND ROBUST MONITORING OF FLOOD EVENTS USING SENTINEL-1 AND LANDSAT DATA ON THE GOOGLE EARTH ENGINE	5.6402823	76	38.000000
5	BIORESITA F;PUISSANT A...	2018	A METHOD FOR AUTOMATIC AND RAPID MAPPING OF WATER SURFACES FROM SENTINEL-1 IMAGERY	4.1831909	101	25.250000
5	LIANG J;LIU D	2020	A LOCAL THRESHOLDING APPROACH TO FLOOD WATER DELINEATION USING SENTINEL-1 SAR IMAGERY	7.9276724	51	25.500000
6	FOWLER KJA;PEEL MC;WES...	2016	SIMULATING RUNOFF UNDER CHANGING CLIMATIC CONDITIONS: REVISITING AN APPARENT DEFICIENCY OF CONCEPTUAL RAINFALL-RUNOFF MODELS	4.7142304	98	16.333333
6	HRACHOWITZ M;CLARK MP	2017	HESS OPINIONS: THE COMPLEMENTARY MERITS OF COMPETING MODELLING PHILOSOPHIES IN HYDROLOGY	4.0632645	85	17.000000
6	MCINERNEY D;THYER M;KA...	2017	IMPROVING PROBABILISTIC PREDICTION OF DAILY STREAMFLOW BY IDENTIFYING PARETO OPTIMAL APPROACHES FOR MODELING HETEROSCEDAST...	4.3373303	68	13.600000
6	CLARK MP;BIERKENS MFP;...	2017	THE EVOLUTION OF PROCESS-BASED HYDROLOGIC MODELS: HISTORICAL CHALLENGES AND THE COLLECTIVE QUEST FOR PHYSICAL REALISM	2.2596769	105	21.000000
6	FENICIA F;KAVETSKI D;S...	2016	FROM SPATIALLY VARIABLE STREAMFLOW TO DISTRIBUTED HYDROLOGICAL MODELS: ANALYSIS OF KEY MODELING DECISIONS	3.5423891	61	10.166667
6	NIJZINK RC;ALMEIDA S;P...	2018	CONSTRAINING CONCEPTUAL HYDROLOGICAL MODELS WITH MULTIPLE INFORMATION SOURCES	3.6744203	52	13.000000
6	RAKOVEC O;KUMAR R;ATTI...	2016	IMPROVING THE REALISM OF HYDROLOGIC MODEL FUNCTIONING THROUGH MULTIVARIATE PARAMETER ESTIMATION	2.7731872	68	11.333333
6	BRODERICK C;MATTHEWS T...	2016	TRANSFERABILITY OF HYDROLOGICAL MODELS AND ENSEMBLE AVERAGING METHODS BETWEEN CONTRASTING CLIMATIC PERIODS	3.4882365	49	8.166667
6	NIJZINK RC;SAMANIEGO L...	2016	THE IMPORTANCE OF TOPOGRAPHY-CONTROLLED SUB-GRID PROCESS HETEROGENEITY AND SEMI-QUANTITATIVE PRIOR CONSTRAINTS IN DISTRIBU...	4.0447162	41	6.833333
6	KHATAMI S;PEEL MC;PETE...	2019	EQUIFINALITY AND FLUX MAPPING: A NEW APPROACH TO MODEL EVALUATION AND PROCESS REPRESENTATION UNDER UNCERTAINTY	4.3988652	35	11.666667
7	HEMMATI R	2018	OPTIMAL DESIGN AND OPERATION OF ENERGY STORAGE SYSTEMS AND GENERATORS IN THE NETWORK INSTALLED WITH WIND TURBINES CONSIDER...	2.0185063	60	15.000000
7	LEONARD MD;MICHAELIDES...	2020	ENERGY STORAGE NEEDS FOR THE SUBSTITUTION OF FOSSIL FUEL POWER PLANTS WITH RENEWABLES	0.8278966	103	51.500000
7	GUO H;XU Y;CHEN H;GUO ...	2017	THERMODYNAMIC ANALYTICAL SOLUTION AND EXERGY ANALYSIS FOR SUPERCRITICAL COMPRESSED AIR ENERGY STORAGE SYSTEM	1.9674034	41	8.200000
7	MARCHI B;PASETTI M;ZAN...	2017	LIFE CYCLE COST ANALYSIS FOR BESS OPTIMAL SIZING	1.8881441	38	7.600000
7	CHEN LX;XIE MN;ZHAO PP...	2018	A NOVEL ISOBARIC ADIABATIC COMPRESSED AIR ENERGY STORAGE (IA-CAES) SYSTEM ON THE BASE OF VOLATILE FLUID	1.7532343	39	9.750000
7	ACAR C	2018	A COMPREHENSIVE EVALUATION OF ENERGY STORAGE OPTIONS FOR BETTER SUSTAINABILITY	1.5946272	40	10.000000
7	CHEN LX;HU P;ZHAO PP;X...	2018	A NOVEL THROTTLING STRATEGY FOR ADIABATIC COMPRESSED AIR ENERGY STORAGE SYSTEM BASED ON AN EJECTOR	1.6855203	36	9.000000
7	HUNT JD;BYERS E;WADA Y...	2020	GLOBAL RESOURCE POTENTIAL OF SEASONAL PUMPED HYDROPOWER STORAGE FOR ENERGY AND WATER STORAGE	1.0654940	50	25.000000
7	MEHRJERDI H	2019	MULTILEVEL HOME ENERGY MANAGEMENT INTEGRATED WITH RENEWABLE ENERGIES AND STORAGE TECHNOLOGIES CONSIDERING CONTINGENCY OPER...	2.0098641	26	8.666667
7	BROWN T;SCHLACHTBERGER...	2018	SYNERGIES OF SECTOR COUPLING AND TRANSMISSION REINFORCEMENT IN A COST-OPTIMISED, HIGHLY RENEWABLE EUROPEAN ENERGY SYSTEM	0.2247438	229	57.250000
8	ANDRE CM;HAUSMAN J-F;G...	2016	CANNABIS SATIVA: THE PLANT OF THE THOUSAND AND ONE MOLECULES	1.3130552	545	90.833333
8	LUO X;REITER MA;D'ESPA...	2019	COMPLETE BIOSYNTHESIS OF CANNABINOIDS AND THEIR UNNATURAL ANALOGUES IN YEAST	0.6650644	265	88.333333
8	PELLATI F;BRIGHENTI V;...	2018	NEW METHODS FOR THE COMPREHENSIVE ANALYSIS OF BIOACTIVE COMPOUNDS IN CANNABIS SATIVA L. (HEMP)	1.8313582	82	20.500000
8	HARTSEL JA;EADES J;HIC...	2016	CANNABIS SATIVA AND HEMP	1.4393210	99	16.500000
8	BOOTH JK;PAGE JE;BOHLM...	2017	TERPENE SYNTHASES FROM CANNABIS SATIVA	1.2695218	111	22.200000
8	BRIGHENTI V;PELLATI F;...	2017	DEVELOPMENT OF A NEW EXTRACTION TECHNIQUE AND HPLC METHOD FOR THE ANALYSIS OF NON-PSYCHOACTIVE CANNABINOIDS IN FIBRE-TYPE ...	0.8602153	119	23.800000
8	ZAGER JJ;LANGE I;SRIVI...	2019	GENE NETWORKS UNDERLYING CANNABINOID AND TERPENOID ACCUMULATION IN CANNABIS	2.2500561	44	14.666667
8	LIVINGSTON SJ;QUILICHI...	2020	CANNABIS GLANDULAR TRICHOMES ALTER MORPHOLOGY AND METABOLITE CONTENT DURING FLOWER MATURATION	1.5939913	58	29.000000
8	HAZEKAMP A;TEJKALOVÁ K...	2016	CANNABIS: FROM CULTIVAR TO CHEMOVAR II - A METABOLOMICS APPROACH TO CANNABIS CLASSIFICATION	0.8243384	83	13.833333
8	WELLING MT;LIU L;SHAPT...	2016	CHARACTERISATION OF CANNABINOID COMPOSITION IN A DIVERSE CANNABIS SATIVA L. GERMPLASM COLLECTION	1.8670628	30	5.000000
NA	SANTOS JA;FRAGA H;MALH...	2020	A REVIEW OF THE POTENTIAL CLIMATE CHANGE IMPACTS AND ADAPTATION OPTIONS FOR EUROPEAN VITICULTURE	0.9417228	99	49.500000
NA	PARKER AK;GARCÍA DE CO...	2020	TEMPERATURE-BASED GRAPEVINE SUGAR RIPENESS MODELLING FOR A WIDE RANGE OF VITIS VINIFERA L. CULTIVARS	1.1668973	27	13.500000
NA	SOUKOULIS C;CAMBIER S;...	2016	CHEMICAL STABILITY AND BIOACCESSIBILITY OF Β-CAROTENE ENCAPSULATED IN SODIUM ALGINATE O/W EMULSIONS: IMPACT OF CA2+ MEDIAT...	0.6897289	38	6.333333
NA	GERHARDS M;SCHLERF M;M...	2019	CHALLENGES AND FUTURE PERSPECTIVES OF MULTI-/HYPERSPECTRAL THERMAL INFRARED REMOTE SENSING FOR CROP WATER-STRESS DETECTION...	0.3555093	70	23.333333
NA	MOLITOR D;JUNK J	2019	CLIMATE CHANGE IS IMPLICATING A TWO-FOLD IMPACT ON AIR TEMPERATURE INCREASE IN THE RIPENING PERIOD UNDER THE CONDITIONS OF...	1.0316848	24	8.000000
NA	TORREGROSSA D;HANSEN J...	2017	A DATA-DRIVEN METHODOLOGY TO SUPPORT PUMP PERFORMANCE ANALYSIS AND ENERGY EFFICIENCY OPTIMIZATION IN WASTE WATER TREATMENT...	0.6591468	35	7.000000
NA	CORTE-REAL J;IDDIR M;S...	2016	EFFECT OF DIVALENT MINERALS ON THE BIOACCESSIBILITY OF PURE CAROTENOIDS AND ON PHYSICAL PROPERTIES OF GASTRO-INTESTINAL FL...	0.5733862	39	6.500000
NA	SOUKOULIS C;BOHN T	2018	A COMPREHENSIVE OVERVIEW ON THE MICRO- AND NANO-TECHNOLOGICAL ENCAPSULATION ADVANCES FOR ENHANCING THE CHEMICAL STABILITY ...	0.2000788	99	24.750000
NA	SOUKOULIS C;TSEVDOU M;...	2017	MODULATION OF CHEMICAL STABILITY AND IN VITRO BIOACCESSIBILITY OF BETA-CAROTENE LOADED IN KAPPA-CARRAGEENAN OIL-IN-GEL EMU...	0.5478256	35	7.000000
NA	PASQUALI M;BEYER M;LOG...	2016	A EUROPEAN DATABASE OF FUSARIUM GRAMINEARUM AND F. CULMORUM TRICHOTHECENE GENOTYPES	0.2029387	93	15.500000

5.1.3 Development

`summarise()` has grouped output by 'com_name'. You can override using the `.groups` argument.

5.1.4 Connectivity between the research areas

5.2 Technical description

In a bibliographic coupling network, the coupling-strength between publications is determined by the number of commonly cited references they share, assuming a common pool of references to indicate similarity in context, methods, or theory. Formally, the strength of the relationship between a publication pair \(i\) and \(j\) (\(s_{i,j}^{bib}\)) is expressed by the number of commonly cited references.

\[s_{i,j}^{bib} = \sum_m c_{i,m} c_{j,m}\]

Since our corpus contains publications which differ strongly in terms of the number of cited references, we normalize the coupling strength by the Jaccard similarity coefficient. Here, we weight the intercept of two publications’ bibliography (shared refeences) by their union (number of all references cited by either \(i\) or \(j\)). It is bounded between zero and one, where one indicates the two publications to have an identical bibliography, and zero that they do not share any cited reference. Thereby, we prevent publications from having high coupling strength due to a large bibliography (e.g., literature surveys).

\[S_{i,j}^{jac-bib} =\frac{C(i \cap j)}{C(i \cup j)} = \frac{s_{i,j}^{bib}}{c_i + c_j - s_{i,j}^{bib}}\]

More recent articles have a higher pool of possible references to co-cite to, hence they are more likely to be coupled. Consequently, bibliographic coupling represents a forward looking measure, and the method of choice to identify the current knowledge frontier at the point of analysis.

6 Additional analysis

6.1 Authors, Themes & Journals

7 Endnotes

file.copy(from = “path_to_original_file”, to = “path_to_move_to”)

Then you can remove the original file with file.remove():

file.remove(“path_to_original_file”)